S1.02: Green Coding, sustainable solutions for computational work and research. A chat with Patrick Penndorf
In this episode, we explore the pressing and relevant topic of sustainability in the context of bioinformatics and computational biology. We had the fantastic opportunity to discuss with Patrick Penndorf, a partner of ReAdvance, where he shares his unique insights, experience, and the importance of being environmentally conscious while being a bioinformatician or computational scientist!
To learn more about this topic, check the following links and websites:
ReAdvance
- Main website: www.Re-Advance.com
- Bioinformatics: https://re-advance.com/bioinformatics/
- Social Media: https://linktr.ee/readvance
- Patrick Penndorf: https://www.linkedin.com/in/patrick-penndorf/?originalSubdomain=de
Relevant literature and other Resources:
- Crop Pest - cutoff for increased quality: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8739801/
- Ten recommendations for reducing the carbon footprint of research computing in human neuroimaging: https://direct.mit.edu/imag/article/doi/10.1162/imag_a_00043/118246/Ten-recommendations-for-reducing-the-carbon
- Impact of training LLM: https://arxiv.org/abs/2211.02001
- FAIR Principles: https://www.nature.com/articles/sdata201618
- The efficiency of languages and run-time vs. sustainability: https://www.sciencedirect.com/science/article/abs/pii/S0167642321000022
- CO2nduct initiative: https://www.nature.com/articles/s42005-022-00930-2
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